Habitat Functions

Functions that create habitat estimates given flow and some additional helper functions.

set_spawning_habitat()

Set Spawning Habitat Area

set_instream_habitat()

Set Instream Habitat Area

set_floodplain_habitat()

Set Floodplain Habitat Area

set_bypass_habitat()

Set Bypass Habitat Area

wua_to_area()

WUA to Area in Square Meters

apply_suitability()

Apply Suitability Factor

square_meters_to_acres()

Square Meters to Acres

acres_to_square_meters()

Acres to Square Meters

get_weeks_flooded()

Duration of Floodplain Inundation

get_habitat_selector()

Get Habitat Selector

Habitat Datasets

Flow to area rearing and spawning modeled relationships

habitat_data american_river_instream american_river_floodplain antelope_creek_floodplain battle_creek_instream battle_creek_floodplain bear_creek_floodplain bear_river_instream bear_river_floodplain big_chico_creek_floodplain butte_creek_instream butte_creek_floodplain calaveras_river_instream calaveras_river_floodplain clear_creek_instream clear_creek_floodplain cosumnes_river_instream cosumnes_river_floodplain cottonwood_creek_instream cottonwood_creek_floodplain cow_creek_instream cow_creek_floodplain deer_creek_floodplain elder_creek_floodplain feather_river_instream feather_river_floodplain merced_river_instream merced_river_floodplain mill_creek_floodplain mokelumne_river_instream mokelumne_river_floodplain paynes_creek_floodplain san_joaquin_river_instream san_joaquin_river_floodplain stanislaus_river_instream stanislaus_river_floodplain stony_creek_floodplain thomes_creek_floodplain tuolumne_river_instream tuolumne_river_floodplain yuba_river_instream yuba_river_floodplain upper_mid_sac_region_instream

Habitat Data

sacramento_habitat upper_sac_ACID_boards_in upper_sac_ACID_boards_out upper_sacramento_river_instream upper_sacramento_river_floodplain upper_mid_sacramento_river_instream upper_mid_sacramento_river_floodplain lower_mid_sacramento_river_instream lower_mid_sacramento_river_floodplain lower_sacramento_river_instream lower_sacramento_river_floodplain

Mainstem Sacramento River Habitat Data

bypass_habitat yolo_bypass_habitat sutter_bypass_habitat

Bypass Flow to Habitat Area Relationships

delta_rearing_habitat

Delta Habitat Area

Miscellaneous Datasets

Datasets used as reference tables

modeling_exist

Habitat Modeling Status

watershed_lengths

Habitat Extent Lengths

weeks_inundated

Flow Thresholds for Number of Weeks Inundated

inchannel_habitat_adult

Steelhead Adult Rearing Habitat

pools

Pool Area

spawning_decay_multiplier

Spawning Decay Multipliers

spawning_habitat_average

Spawning Habitat Average

watershed_decay_status

Watershed Decay Status

watershed_spawning_decays

Watershed Spawning Habitat Decays

Model Input Data

Data used directly as inputs to the DSM model

fr_fry wr_fry sr_fry st_fry lfr_fry

Fry Inchannel Habitat

fr_juv wr_juv sr_juv st_juv lfr_juv

Juvenile Inchannel Habitat

fr_spawn wr_spawn sr_spawn st_spawn lfr_spawn

Spawning Habitat

fr_fp wr_fp sr_fp st_fp lfr_fp

Floodplain Habitat

weeks_flooded

Floodplain Habitat Activation Duration

delta_habitat

Delta Habitat Array

sutter_habitat yolo_habitat

Bypass Habitat Area

tisdale_bypass_watershed yolo_bypass_watershed south_delta_routed_watersheds

Watershed Routing

prop_high_predation prob_strand_early prob_strand_late prob_nest_scoured

Expert Estimated Probabilities

contact_points delta_contact_points

Number of Contact Points

delta_prop_high_predation

Probability High Predation in the Deltas