Route Bypass

Determines if juveniles remain in the bypass or out migrate

route_bypass(
  bypass_fish,
  bypass_habitat,
  migration_survival_rate,
  territory_size,
  stochastic,
  hypothesis,
  filling_fn = fallRunDSM::fill_regional,
  filling_args = NULL
)

Source

IP-117068

Arguments

bypass_fish

An n by 4 matrix of juvenile fish by watershed and size class

bypass_habitat

A vector of available habitat in square meters

migration_survival_rate

The outmigration survival rate

territory_size

Array of juvenile fish territory requirements for fill_regional

stochastic

TRUE FALSE value indicating if model is being run stochastically

hypothesis

Movement hypothesis to use for routing

filling_fn

optional filling function to use in routing procedure, by default it uses fallRunDSM::fill_regional

filling_args

when passing custom filling function, pass function specific arguments as a list here