Juvenile Month Dynamics — juvenile_month

Function to run through monthly juvenile routing and rearing logic.

juvenile_month_dynamic(
  fish,
  year = year,
  month = month,
  rearing_survival = rearing_survival,
  migratory_survival = migratory_survival,
  habitat = habitat,
  ..params = ..params,
  avg_ocean_transition_month = avg_ocean_transition_month,
  stochastic = stochastic,
  juveniles,
  ic_growth,
  fp_growth,
  delta_growth,
  filling_fn = fallRunDSM::fill_natal,
  filling_args = NULL,
  filling_regional_fn = fallRunDSM::fill_regional,
  filling_regional_args = NULL,
  movement_fn = NULL,
  movement_args = NULL,
  movement_months = NULL
)

Arguments

fish: list object containing tracking matrices for juveniles, juveniles at chips, and adults in ocean
year: year
month: month
rearing_survival: rearing survival for year and month
migratory_survival: migratory survival for year and month
habitat: habitat for year and month
..params: full params list from model parms
hypothesis: movement hypothesis to test

Examples

fish = list(juveniles = juveniles,
            north_delta_fish = north_delta_fish,
            south_delta_fish = south_delta_fish,
            juveniles_at_chipps = juveniles_at_chipps,
            adults_in_ocean = adults_in_ocean)
#> Error in eval(expr, envir, enclos): object 'juveniles' not found