apply_enroute_survival.RdThis function calculates the survival of adult salmon during their enroute migration.
apply_enroute_survival(
year,
month,
adults,
month_return_proportions,
gates_overtopped,
tisdale_bypass_watershed,
yolo_bypass_watershed,
migratory_temperature_proportion_over_20,
..surv_adult_enroute_int,
.adult_en_route_migratory_temp,
.adult_en_route_bypass_overtopped,
stochastic
)The year of the simulation.
The starting month of the simulation.
A data frame containing information about adult salmon.
A vector of proportions for each month.
A three-dimensional array containing information about gates overtopped.
A parameter related to the Tisdale bypass watershed.
A parameter related to the Yolo bypass watershed.
A matrix containing proportions of migratory temperatures over 20 degrees.
Additional parameters for adult enroute survival.
Parameter for adult enroute survival related to migratory temperature.
Parameter for adult enroute survival related to bypass overtopped.
Logical indicating whether to include stochastic elements in the simulation.
Parameter for adult enroute survival related to adult harvest rate.
A list containing the initial number of adults, the proportion of natural adults, and the initial number of adults by month.